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Siming Zhao, PhD

Title(s)
Assistant Professor of Biomedical Data Science

Department(s)
Biomedical Data Science

Education
2010 B.S. Tsinghua University, Beijing
2015 Ph.D. Yale University, New Haven

Programs
Dartmouth Cancer Center
Quantitative Biomedical Sciences

Websites
https://www.simingzhaolab.org/

Contact Information


Professional Interests

Dr. Zhao's research focuses on studying the genetic etiology of human diseases, in particular, cancer. Her lab develops computational methods and tools to analyze large-scale genomic datasets, aiming to translate data into biological insights. Specific areas of interest include modeling of mutation selection in cancer, genotype-phenotype association analysis, integration of multiple types of genomic datasets for disease gene discovery.

Rotations and Thesis Projects

Methods development for studying mutations in noncoding regions in cancer
Impacts of genetic backgrounds for cancer phenotypes
Causal gene/pathway identification in genome wide association analysis

Biography

Dr. Zhao completed her PhD in Genetics at Yale University and received post-doctoral training at University of Chicago. She has broad training in genetics, cancer biology, bioinformatics and statistical genetics. In the past, she developed computational methods to study the genetics of cancer and other complex diseases. She also also led the analysis of several cancer whole-exome sequencing projects. She is interested in the roles of genetic variations in cancer and computational methods to translate large-scale genomic data into disease mechanisms.


Selected Publications

 

Adjusting for genetic confounders in transcriptome-wide association studies improves discovery of risk genes of complex traits.
Zhao S, Crouse W, Qian S, Luo K, Stephens M, He X
Nat Genet. 2024 Feb;56(2):336-347. doi: 10.1038/s41588-023-01648-9. Epub 2024 Jan 26.
PMID: 38279041

View more publications on PubMed