Publications

The endogenous antigen-specific CD8(+) T cell repertoire is composed of unbiased and biased clonotypes with differential fate commitments.
Abdullah L, Emiliani FE, Vaidya CM, Stuart H, Musial SC, Kolling FW, Obar JJ, Rosato PC, Ackerman ME, Song L, McKenna A, Huang YH
Immunity. 2025 Mar 11;58(3):601-615.e9. doi: 10.1016/j.immuni.2025.02.001. Epub 2025 Feb 27.
PMID: 40020673

KLF2 maintains lineage fidelity and suppresses CD8 T cell exhaustion during acute LCMV infection.
Fagerberg E, Attanasio J, Dien C, Singh J, Kessler EA, Abdullah L, Shen J, Hunt BG, Connolly KA, De Brouwer E, He J, Iyer NR, Buck J, Borr ER, Damo M, Foster GG, Giles JR, Huang YH, Tsang JS, Krishnaswamy S, Cui W, Joshi NS
Science. 2025 Jan 2;387(6735):eadn2337. doi: 10.1126/science.adn2337. Epub 2025 Feb 14.
PMID: 39946463

CD4 T cell depletion increases memory differentiation of endogenous and CAR T cells and enhances the efficacy of Super2 and IL-33-armored CAR T cells against solid tumors.
Mohamed AO, Boone DT, Ferry SL, Peck MC, Santos AM, Soderholm HE, Wittling MC, Paulos C, Turk MJ, Huang YH
J Immunother Cancer. 2025 Feb 11;13(2) doi: 10.1136/jitc-2024-009994. Epub 2025 Feb 11.
PMID: 39933839

Depletion of conventional CD4(+) T cells is required for robust priming and dissemination of tumor antigen-specific CD8(+) T cells in the setting of anti-CD4 therapy.
Ramirez DE, Dragnev CPC, Searles TG, Spicer N, Chen T, Lines JL, Hawkes AR, Davis WL, Mohamed A, Shirai K, Phillips JD, Rosato PC, Huang YH, Turk MJ
J Immunother Cancer. 2024 Nov 9;12(11) doi: 10.1136/jitc-2024-010170. Epub 2024 Nov 9.
PMID: 39521617

Anesthetic Oxygen Use and Sex Are Critical Factors in the FLASH Sparing Effect.
Tavakkoli AD, Clark MA, Kheirollah A, Sloop AM, Soderholm HE, Daniel NJ, Petusseau AF, Huang YH, Thomas CR Jr, Jarvis LA, Zhang R, Pogue BW, Gladstone DJ, Hoopes PJ
Adv Radiat Oncol. 2024 Jun;9(6):101492. doi: 10.1016/j.adro.2024.101492. Epub 2024 Mar 13.
PMID: 38711960

Hierarchal single-cell lineage tracing reveals differential fate commitment of CD8 T-cell clones in response to acute infection.
Abdullah L, Emiliani FE, Vaidya CM, Stuart H, Kolling FW, Ackerman ME, Song L, McKenna A, Huang YH
bioRxiv. 2024 Mar 27; pii: 2024.03.21.586160. doi: 10.1101/2024.03.21.586160. Epub 2024 Mar 27.
PMID: 38585810

Anesthetic oxygen use and sex are critical factors in the FLASH sparing effect.
Tavakkoli AD, Clark MA, Kheirollah A, Sloop AM, Soderholm HE, Daniel NJ, Petusseau AF, Huang YH, Thomas CR, Jarvis LA, Zhang R, Pogue BW, Gladstone DJ, Hoopes PJ
bioRxiv. 2023 Nov 5; pii: 2023.11.04.565626. doi: 10.1101/2023.11.04.565626. Epub 2023 Nov 5.
PMID: 37961549

In the right place at the right time: tissue-resident memory T cells in immunity to cancer.
Ramirez DE, Mohamed A, Huang YH, Turk MJ
Curr Opin Immunol. 2023 Aug;83:102338. doi: 10.1016/j.coi.2023.102338. Epub 2023 May 23.
PMID: 37229984

Toward high-throughput engineering techniques for improving CAR intracellular signaling domains.
Butler SE, Hartman CJ, Huang YH, Ackerman ME
Front Bioeng Biotechnol. 2023;11:1101122. doi: 10.3389/fbioe.2023.1101122. Epub 2023 Mar 27.
PMID: 37051270

Cell type-specific Interaction Analysis using Doublets in scRNA-seq (CIcADA).
Schiebout C, Lust HE, Huang YH, Frost HR
bioRxiv. 2023 Feb 15; pii: 2023.02.13.528326. doi: 10.1101/2023.02.13.528326. Epub 2023 Feb 15.
PMID: 36824707