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Selected Publications

Kerley-Hamilton, J.S., W.W. Trask, C.J. Ridley, E. Dufour, C. Lesseur, C.S. Ringelberg, K.L. Moodie, S.L. Shipman, M. Korc, J. Gui, N.W. Shworak, C.R. Tomlinson. (2012). Inherent and Benzo[a]pyrene-Induced Differential Aryl Hydrocarbon Receptor Signaling Greatly Affects Lifespan, Atherosclerosis, Cardiac Gene Expression, and Body and Heart Growth in Mice (in press).

Thornley, J.A., H.W. Trask, C.S. Ringelberg, C.J.A. Ridley, S. Wang, R. Cowper Sal-Lari, J.H. Moore, M. Korc, and C.R. Tomlinson. (2012). SMAD4-dependent polysome RNA recruitment in human pancreatic cancer cells. Molec. Carcinogenesis (in press).

Thornley, J.A., H.W. Trask, C.J. Ridley, M. Korc, J. Gui, C.S. Ringelberg, S. Wang, and C.R. Tomlinson. (2011). Differential regulation of polysome mRNA levels in mouse hepa-1c1c7 cells exposed to dioxin. Toxicol. In Vitro 45: 1457-1467.

Trask, H.W., R. Cowper-Sal·lari, M.A. Sartor, J. Gui, C.V. Heath, J. Renuka, A.J. Higgins, P. Andrews, M. Korc, J.H. Moore, and C.R. Tomlinson. (2009). Microarray analysis of cytoplasmic versus whole cell RNA reveals a considerable number of missed and false positive mRNAs. RNA 15: 1917-1928.

Medvedovic, M., D. Halbleib, M.L. Miller, K. LaDow, M.A. Sartor, and C.R. Tomlinson. (2009). Gene expression profiling of blood to predict the onset of leukemia. Blood Cells Mol. Dis. 42: 64-70.

Tsonis, P.A., M.K. Call, M.W. Grogg, M.A. Sartor, R.R. Taylor, A. Forge, R. Fyffe, R. Goldenberg, R. Cowper-Sal Lari, and C.R. Tomlinson. (2007). MicroRNAs and regeneration: Let-7 members as potential regulators of dedifferentiation in lens and inner ear hair cell regeneration of the adult newt. Biochem. Biophys. Res. Commun. 362: 940-945.

Heim, K.C., K.A. White, D. Deng, C.R. Tomlinson, J.H. Moore, S.J. Freemantle, and M.J. Spinella. (2007). Selective repression of retinoic acid target genes by RIP140 during induced tumor cell differentiation of pluripotent human embryonal carcinoma cells. Mol. Cancer 6: 57-74.

Sartor, M.A., C.R. Tomlinson, S.C. Wesselkamper, S. Sivaganesan, G.D. Leikauf, and M. Medvedovic. (2006). Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments. BMC Bioinformatics 7: 538.

Tomlinson, C.R., and M. Korc. (2006). Squeezing data from pancreatic juice. Cancer Biol. Ther. 5: 1390-1391.

Schwanekamp, J.A., M.A. Sartor, S. Karyala, D. Halbleib, M. Medvedovic, and C.R. Tomlinson. (2006). Genome-wide analyses show that nuclear and cytoplasmic RNA levels are differentially affected by dioxin. Biochim. Biophys. Acta 1759: 388-402.

Sartor, M.A., A.M. Zorn, J.A. Schwanekamp, D. Halbleib, S. Karyal, M.L. Howell, G.E. Dean, M. Medvedovic, C.R. Tomlinson. (2006). A new method to remove hybridization bias for interspecies comparison of global gene expression profiles uncovers an association between mRNA sequence divergence and differential gene expression in Xenopus. Nucl. Acids Res. 34: 185-200.