Publications for H Robert Frost, PhD https://geiselmed.dartmouth.edu/faculty/facultydb/view.php?uid=6572 Publications for H Robert Frost, PhD en-us <![CDATA[Benchmarking sketching methods on spatial transcriptomics data.]]> https://www.ncbi.nlm.nih.gov/pubmed/42109248 Nucleic Acids Res. 2026 May 5;54(9) doi: 10.1093/nar/gkag434.
PMID: 42109248]]> <![CDATA[Analysis of biological networks using Krylov subspace trajectories.]]> https://www.ncbi.nlm.nih.gov/pubmed/41959399 bioRxiv. 2026 Mar 31; pii: 2026.03.29.715092. doi: 10.64898/2026.03.29.715092. Epub 2026 Mar 31.
PMID: 41959399]]> <![CDATA[A Composite interaction Score: Prioritizing cell-cell interactions from single-cell RNA-seq with application to pre-menopausal epithelial barriers.]]> https://www.ncbi.nlm.nih.gov/pubmed/41875947 J Adv Res. 2026 Mar 22; pii: S2090-1232(26)00267-5. doi: 10.1016/j.jare.2026.03.046. Epub 2026 Mar 22.
PMID: 41875947]]> <![CDATA[Antibody responses against bacterial glycans affinity mature and diversify in germinal centers.]]> https://www.ncbi.nlm.nih.gov/pubmed/41812644 Immunity. 2026 Mar 10;59(3):666-681.e5. doi: 10.1016/j.immuni.2026.02.006.
PMID: 41812644]]> <![CDATA[Randomized Spatial PCA (RASP): A computationally efficient method for dimensionality reduction of high-resolution spatial transcriptomics data.]]> https://www.ncbi.nlm.nih.gov/pubmed/41370353 PLoS Comput Biol. 2025 Dec;21(12):e1013759. doi: 10.1371/journal.pcbi.1013759. Epub 2025 Dec 10.
PMID: 41370353]]> <![CDATA[Revealing tissue architecture through the hypercomplex Fourier analysis of spatial transcriptomics data.]]> https://www.ncbi.nlm.nih.gov/pubmed/41195088 Bioinform Adv. 2025;5(1):vbaf191. doi: 10.1093/bioadv/vbaf191. Epub 2025 Aug 11.
PMID: 41195088]]> <![CDATA[Mouse-Specific Single cell cytokine activity prediction and Estimation (MouSSE).]]> https://www.ncbi.nlm.nih.gov/pubmed/40971965 PLoS Comput Biol. 2025 Sep;21(9):e1013475. doi: 10.1371/journal.pcbi.1013475. Epub 2025 Sep 19.
PMID: 40971965]]> <![CDATA[Benchmarking sketching methods on spatial transcriptomics data.]]> https://www.ncbi.nlm.nih.gov/pubmed/40909701 bioRxiv. 2025 Sep 2; pii: 2025.08.26.672376. doi: 10.1101/2025.08.26.672376. Epub 2025 Sep 2.
PMID: 40909701]]> <![CDATA[Gene set optimization for cancer transcriptomics using sparse principal component analysis.]]> https://www.ncbi.nlm.nih.gov/pubmed/40661635 bioRxiv. 2025 May 26; pii: 2025.05.21.655279. doi: 10.1101/2025.05.21.655279. Epub 2025 May 26.
PMID: 40661635]]> <![CDATA[Cell signaling characterization for spatial transcriptomics (ST) data using network analysis.]]> https://www.ncbi.nlm.nih.gov/pubmed/40510773 Complex Netw Appl. 2025;1189:394-405. doi: 10.1007/978-3-031-82435-7_32. Epub 2025 Mar 28.
PMID: 40510773]]>