{"id":444,"date":"2017-05-02T14:04:51","date_gmt":"2017-05-02T18:04:51","guid":{"rendered":"https:\/\/geiselmed2.dartmouth.edu\/dartlab\/useful-links\/"},"modified":"2017-05-02T14:04:51","modified_gmt":"2017-05-02T18:04:51","slug":"useful-links","status":"publish","type":"page","link":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/services\/flow-cytometry\/useful-links\/","title":{"rendered":"Useful Links"},"content":{"rendered":"\n<p>Cell Preparation:<\/p>\n<p><a href=\"http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/cell-preparation-for-flow-cytometry.pdf\" target=\"_blank\">http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/cell-preparation-for-flow-cytometry.pdf<\/a><\/p>\n<p>Annexin V:<a href=\"http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/annexin-v-staining.pdf\" target=\"_blank\">http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/annexin-v-staining.pdf<\/a>(This shows with PI\/7-AAF and fixable viability dyes)Viability Staining:<a href=\"http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/viability-staining.pdf\" target=\"_blank\">http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/viability-staining.pdf<\/a>(Includes PI\/7-AAD and Fixable Dyes. eBioscience Specific)Cell surface staining:<a href=\"http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/staining-cell-surface-antigens-for-flow-cytometry.pdf\" target=\"_blank\">http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/staining-cell-surface-antigens-for-flow-cytometry.pdf<\/a>Intracellular and Intranuclear Staining:<a href=\"http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/staining-intracellular-antigens-for-flow-cytometry.pdf\" target=\"_blank\">http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/staining-intracellular-antigens-for-flow-cytometry.pdf<\/a>Proliferation:<a href=\"http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/proliferatione-dyes-for-flow-cytometry.pdf\" target=\"_blank\">http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/proliferatione-dyes-for-flow-cytometry.pdf<\/a>(covers a couple eFluor dyes as well as CFSE; should double check that the CFSE concentration is consistent with our SOP)<\/p>\n<p><a href=\"http:\/\/www.maeckerlab.typepad.com\/\"> <\/a><\/p>\n<p><a href=\"http:\/\/www.maeckerlab.typepad.com\/\">Tissue Dissociation Guide:<\/a><a href=\"http:\/\/www.maeckerlab.typepad.com\/\"> <\/a><a href=\"http:\/\/www.maeckerlab.typepad.com\/\"><\/a><a href=\"http:\/\/www.worthington-biochem.com\/tissuedissociation\/default.html\" target=\"_blank\">http:\/\/www.worthington-biochem.com\/tissuedissociation\/default.html<\/a><\/p>\n<p><a href=\"http:\/\/www.maeckerlab.typepad.com\/\">http:\/\/www.maeckerlab.typepad.com\/<\/a><\/p>\n<p><a href=\"http:\/\/www.isac-net.org\/\">http:\/\/www.isac-net.org\/<\/a><\/p>\n<p><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed\/18307257\">How many events are enough?<\/a><\/p>\n<p><a href=\"http:\/\/www.isac-net.org\/media\/standards\/miflowcyt\/MIFlowCyt_080221.pdf\">Minimum information about a flow cytometry experiment<\/a> (MiFlowCyt)<\/p>\n<p><a title=\"MIATA\" href=\"http:\/\/miataproject.org\/\">Minimal Information About T cell Assays<\/a> (MIATA)<\/p>\n<p><a title=\"MIATA checklist\" href=\"http:\/\/miataproject.org\/implementation\/tool-checklist\/\">MIATA checklist<\/a><\/p>\n<p><a title=\"MIATA Easy Reporting\" href=\"http:\/\/miataproject.org\/easy_reporting\/\">MIATA Easy Reporting of Experiments<\/a><\/p>\n<p><a style=\"font-size: 13px\" title=\"Macrophage activation and polarization (Murray et al., 2014)\" href=\"http:\/\/www.ncbi.nlm.nih.gov\/pubmed?term=%22Immunity%22%5BJour%5D+AND+41%5Bvolume%5D+AND+14%5Bpage%5D&amp;cmd=detailssearch\" target=\"_blank\">Macrophage activation and polarization: nomenclature and experimental guidelines<\/a><\/p>\n<p><a title=\"Fluorescence spectrum viewer\" href=\"http:\/\/www.bdbiosciences.com\/research\/multicolor\/spectrum_viewer\/index.jsp\">BD fluorescence spectrum viewer<\/a><\/p>\n<p><a title=\"Amine-reactive viability dyes\" href=\"http:\/\/onlinelibrary.wiley.com\/doi\/10.1002\/0471142956.cy0934s53\/full\">Amine-reactive dyes for dead cell discrimination in fixed samples (Perfetto et al., 2010)<\/a><\/p>\n<p><a href=\"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-content\/uploads\/sites\/22\/2017\/05\/Compensation_Multicolor_TechBulletin.pdf\">BD compensation multicolor technical bulletin (2009)<\/a><\/p>\n<p><a href=\"http:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC2034273\/?tool=pubmed\">Optimizing a multi-color immunophenotyping assay (Mahnke &amp; Roederer, 2007)<\/a><\/p>\n<p>A very helpful tool to appreciate absolute cell numbers to be expected is the <a href=\"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-content\/uploads\/sites\/22\/2017\/05\/CellTypes-StemCell.pdf\">Frequencies of Cell Types<\/a> chart published by StemCell Technologies.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Cell Preparation: http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/cell-preparation-for-flow-cytometry.pdf Annexin V:http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/annexin-v-staining.pdf(This shows with PI\/7-AAF and fixable viability dyes)Viability Staining:http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/viability-staining.pdf(Includes PI\/7-AAD and Fixable Dyes. eBioscience Specific)Cell surface staining:http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/staining-cell-surface-antigens-for-flow-cytometry.pdfIntracellular and Intranuclear Staining:http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/staining-intracellular-antigens-for-flow-cytometry.pdfProliferation:http:\/\/media.ebioscience.com\/data\/pdf\/best-protocols\/proliferatione-dyes-for-flow-cytometry.pdf(covers a couple eFluor dyes as well as CFSE; should double check that the CFSE concentration is consistent with our SOP) Tissue Dissociation Guide: http:\/\/www.worthington-biochem.com\/tissuedissociation\/default.html http:\/\/www.maeckerlab.typepad.com\/ http:\/\/www.isac-net.org\/ [\u2026] <\/p>\n<div class=\"clear\"><\/div>\n<p><a class=\"more_link clearfix\" href=\"https:\/\/geiselmed.dartmouth.edu\/dartlab\/services\/flow-cytometry\/useful-links\/\" rel=\"nofollow\">Read More<\/a><\/p>\n","protected":false},"author":2,"featured_media":0,"parent":493,"menu_order":8,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-444","page","type-page","status-publish","hentry","author-2"],"jetpack_shortlink":"https:\/\/wp.me\/P9HkEC-7a","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-json\/wp\/v2\/pages\/444","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-json\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-json\/wp\/v2\/comments?post=444"}],"version-history":[{"count":0,"href":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-json\/wp\/v2\/pages\/444\/revisions"}],"up":[{"embeddable":true,"href":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-json\/wp\/v2\/pages\/493"}],"wp:attachment":[{"href":"https:\/\/geiselmed.dartmouth.edu\/dartlab\/wp-json\/wp\/v2\/media?parent=444"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}