Edit Entry

Casey S Greene, Ph.D.

Title(s):
Adjunct Assistant Professor of Genetics

Department(s):
Genetics

Programs:
Molecular and Cellular Biology Graduate Programs
Norris Cotton Cancer Center
Quantitative Biomedical Sciences

Websites:
http://www.greenelab.com

Contact Information:

Email: Casey.S.Greene@Dartmouth.edu


Selected Publications:

 

Erratum to: Evolving hard problems: generating human genetics datasets with a complex etiology.
Himmelstein DS, Greene CS, Moore JH
BioData Min. 2016;9:9. doi: 10.1186/s13040-016-0085-5. Epub 2016 Feb 3.
PMID: 26848312

Cross-platform normalization of microarray and RNA-seq data for machine learning applications.
Thompson JA, Tan J, Greene CS
PeerJ. 2016;4:e1621. doi: 10.7717/peerj.1621. Epub 2016 Jan 21.
PMID: 26844019

Network-based analysis of genetic variants associated with hippocampal volume in Alzheimer's disease: a study of ADNI cohorts.
Song A, Yan J, Kim S, Risacher SL, Wong AK, Saykin AJ, Shen L, Greene CS, Alzheimer’s Disease Neuroimaging Initiative
BioData Min. 2016;9:3. doi: 10.1186/s13040-016-0082-8. Epub 2016 Jan 19.
PMID: 26788126

COMPUTATIONAL APPROACHES TO STUDY MICROBES AND MICROBIOMES.
Greene CS, Foster JA, Stanton BA, Hogan DA, Bromberg Y
Pac Symp Biocomput. 2016;21:557-67.
PMID: 26776218

Leveraging global gene expression patterns to predict expression of unmeasured genes.
Rudd J, Zelaya RA, Demidenko E, Goode EL, Greene CS, Doherty JA
BMC Genomics. 2015 Dec 15;16(1):1065. doi: 10.1186/s12864-015-2250-5. Epub 2015 Dec 15.
PMID: 26666289

Identification of shared and unique susceptibility pathways among cancers of the lung, breast, and prostate from genome-wide association studies and tissue-specific protein interactions.
Qian DC, Byun J, Han Y, Greene CS, Field JK, Hung RJ, Brhane Y, Mclaughlin JR, Fehringer G, Landi MT, Rosenberger A, Bickeboller H, Malhotra J, Risch A, Heinrich J, Hunter DJ, Henderson BE, Haiman CA, Schumacher FR, Eeles RA, Easton DF, Seminara D, Amos CI
Hum Mol Genet. 2015 Dec 20;24(25):7406-20. doi: 10.1093/hmg/ddv440. Epub 2015 Oct 19.
PMID: 26483192

Recent Advances and Emerging Applications in Text and Data Mining for Biomedical Discovery.
Gonzalez GH, Tahsin T, Goodale BC, Greene AC, Greene CS
Brief Bioinform. 2016 Jan;17(1):33-42. doi: 10.1093/bib/bbv087. Epub 2015 Sep 29.
PMID: 26420781

International genome-wide meta-analysis identifies new primary biliary cirrhosis risk loci and targetable pathogenic pathways.
Cordell HJ, Han Y, Mells GF, Li Y, Hirschfield GM, Greene CS, Xie G, Juran BD, Zhu D, Qian DC, Floyd JA, Morley KI, Prati D, Lleo A, Cusi D, Canadian-US PBC Consortium, Italian PBC Genetics Study Group, UK-PBC Consortium, Gershwin ME, Anderson CA, Lazaridis KN, Invernizzi P, Seldin MF, Sandford RN, Amos CI, Siminovitch KA
Nat Commun. 2015 Sep 22;6:8019. doi: 10.1038/ncomms9019. Epub 2015 Sep 22.
PMID: 26394269

Testing multiple hypotheses through IMP weighted FDR based on a genetic functional network with application to a new zebrafish transcriptome study.
Gui J, Greene CS, Sullivan C, Taylor W, Moore JH, Kim C
BioData Min. 2015;8:17. doi: 10.1186/s13040-015-0050-8. Epub 2015 Jun 17.
PMID: 26097506

Understanding multicellular function and disease with human tissue-specific networks.
Greene CS, Krishnan A, Wong AK, Ricciotti E, Zelaya RA, Himmelstein DS, Zhang R, Hartmann BM, Zaslavsky E, Sealfon SC, Chasman DI, FitzGerald GA, Dolinski K, Grosser T, Troyanskaya OG
Nat Genet. 2015 Jun;47(6):569-76. doi: 10.1038/ng.3259. Epub 2015 Apr 27.
PMID: 25915600